PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MA_10157g0010
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Acrogymnospermae; Pinidae; Pinales; Pinaceae; Picea
Family bHLH
Protein Properties Length: 314aa    MW: 33852.1 Da    PI: 6.5794
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MA_10157g0010genomeConGenIEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH46.18.5e-15130176354
                    HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
            HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                    ++h+e+ErrRR+riN+ + +Lr+llP+      +K +Ka+ L +++e++k+L
  MA_10157g0010 130 KSHSEAERRRRERINTHLGTLRSLLPST-----TKTDKASLLAEVIEHLKDL 176
                    79*************************9.....8****************99 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088816.685127176IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000102.9E-12130176IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.105.6E-14131187IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474592.36E-14131186IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003532.4E-13133182IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000832.86E-5140179No hitNo description
CDDcd048731.14E-6214282No hitNo description
Gene3DG3DSA:3.30.70.2601.2E-4214261No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 314 aa     Download sequence    Send to blast
MSGSGSSGDA QFSPWSVPPI QWTSTAGIDQ RMLSCMAPNK EAPSSSYSGF HCGPLQFSYD  60
RLRESGAAVV YGSKSGVGFN GRECGMLQHR QLLANGHGGL FMDGFPAEMA NVAKMTTQEI  120
IDAKALAASK SHSEAERRRR ERINTHLGTL RSLLPSTTKT DKASLLAEVI EHLKDLKRQA  180
LEIAEESAVP TETDELTVDA VPSCGDGKSL VKASVCCDDR PELLSDLIKT LGTLGLCTIK  240
AEITTLGGRV KHELLIDSSN EDNTDYGPPS ISCVHDALKA VMERQNSEGS TTANKRQRLN  300
PFSSIHHIHD GRSI
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1135140ERRRRE
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankFJ0474366e-69FJ047436.1 Pinus taeda isolate 4627 anonymous locus 0_11790_02 genomic sequence.
GenBankFJ0474376e-69FJ047437.1 Pinus taeda isolate 4623 anonymous locus 0_11790_02 genomic sequence.
GenBankFJ0474386e-69FJ047438.1 Pinus taeda isolate 4630 anonymous locus 0_11790_02 genomic sequence.
GenBankFJ0474396e-69FJ047439.1 Pinus taeda isolate 4637 anonymous locus 0_11790_02 genomic sequence.
GenBankFJ0474406e-69FJ047440.1 Pinus taeda isolate 4625 anonymous locus 0_11790_02 genomic sequence.
GenBankFJ0474416e-69FJ047441.1 Pinus taeda isolate 4622 anonymous locus 0_11790_02 genomic sequence.
GenBankFJ0474426e-69FJ047442.1 Pinus taeda isolate 4626 anonymous locus 0_11790_02 genomic sequence.
GenBankFJ0474436e-69FJ047443.1 Pinus taeda isolate 4621 anonymous locus 0_11790_02 genomic sequence.
GenBankFJ0474446e-69FJ047444.1 Pinus taeda isolate 4631 anonymous locus 0_11790_02 genomic sequence.
GenBankFJ0474456e-69FJ047445.1 Pinus taeda isolate 4636 anonymous locus 0_11790_02 genomic sequence.
GenBankFJ0474466e-69FJ047446.1 Pinus taeda isolate 4632 anonymous locus 0_11790_02 genomic sequence.
GenBankFJ0474476e-69FJ047447.1 Pinus taeda isolate 4635 anonymous locus 0_11790_02 genomic sequence.
GenBankFJ0474486e-69FJ047448.1 Pinus taeda isolate 4633 anonymous locus 0_11790_02 genomic sequence.
GenBankFJ0474496e-69FJ047449.1 Pinus taeda isolate 4634 anonymous locus 0_11790_02 genomic sequence.
GenBankFJ0474506e-69FJ047450.1 Pinus taeda isolate 4629 anonymous locus 0_11790_02 genomic sequence.
GenBankFJ0474516e-69FJ047451.1 Pinus taeda isolate 4624 anonymous locus 0_11790_02 genomic sequence.
GenBankFJ0474526e-69FJ047452.1 Pinus taeda isolate 4620 anonymous locus 0_11790_02 genomic sequence.
GenBankJQ2617416e-69JQ261741.1 Pinus radiata isolate 4638 hypothetical protein (0_11790_02) gene, 3' UTR.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009409645.18e-70PREDICTED: transcription factor bHLH30-like
SwissprotQ9S7Y11e-59BH030_ARATH; Transcription factor bHLH30
TrEMBLA0A0C9QX511e-131A0A0C9QX51_9SPER; TSA: Wollemia nobilis Ref_Wollemi_Transcript_1935_1396 transcribed RNA sequence
STRINGGSMUA_Achr1P21280_0015e-69(Musa acuminata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP37715106
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68810.17e-54bHLH family protein